除藻剂新洁尔灭与鲱鱼精子DNA的相互作用
Interaction between the algaecide bromogeramine and herring sperm DNA
-
摘要: 新洁尔灭是一种重要的化学除藻剂,为了探讨新洁尔灭的二次污染问题及其对水生生物可能存在的环境风险,本文在模拟生理条件下利用多种光谱技术和分子模拟技术研究了除藻剂新洁尔灭对鲱鱼精子DNA(hs-DNA)的作用机制,探讨了二者的结合特性和作用力类型,研究了新洁尔灭对hs-DNA空间结构的影响.结果表明,新洁尔灭对hs-DNA没有荧光猝灭作用,新洁尔灭对hs-DNA的空间结构也没有显著影响.通过光谱技术和分子模拟,验证了新洁尔灭与hs-DNA是以沟槽作用相结合且二者作用力类型主要为范德华力.该研究从分子光谱学角度验证了新洁尔灭的低毒性,阐明了新洁尔灭与hs-DNA的结合模式和作用力类型,为评价新洁尔灭的二次污染问题提供了参考.Abstract: Bromogeramine is an important chemical algaecide. In order to investigate the secondary pollution problem and potential environmental risk of bromogeramine, the ineraction mechanism of bromogeramine with herring sperm DNA (hs-DNA) was explored by a number of spectroscopic and molecular modeling methods under physiological conditions. We studied the interaction of bromogeramine with hs-DNA and the binding forces between the two. We also explored the effects of bromogeramine on the hs-DNA conformation. The results indicated that bromogeramine did not quench hs-DNA fluorescence, and it had little effects on the hs-DNA conformation. Based on the results of spectroscopic and molecular docking methods, it was concluded that bromogeramine bound with hs-DNA through groove model mainly by Van der Waals forces. The results suggest low toxicity of bromogeramine, and revealed the binding mode and forces between bromogeramine and hs-DNA. The study could provide an important reference for evaluating the secondary pollution of bromogeramine.
-
Key words:
- bromogeramine /
- herring sperm DNA /
- multi-spectroscopic techniques /
- docking studies
-
-
[1] 汪小雄.化学方法在除藻方面的应用[J].广东化工,2011,38(4):24-26. WANG X X. Application of chemical method in algae removal technology[J]. Guangdong Chemical Industry, 2011, 38(4):24-26(in Chinese).
[2] [3] 洪爱华,尹平河,赵玲,等.新洁而灭对海洋原甲藻赤潮生物的灭杀与抑制[J].海洋环境科学,2003,22(2):64-67. HONG A H, YIN P H, ZHAO L, et al. Studies on bromogeramine for removing and controlling prorocentrum micansred tide[J]. Narine Environmental Science, 2003, 22(2):64-67(in Chinese).
[4] PITOT H C. The molecular biology of carcinogenesis[J]. Cancer, 1993, 72(Suppl 3):962-970. [5] [6] 高东旗,刘育京.新洁尔灭与理化因子协同杀灭细菌芽胞作用的研究[J].中国消毒学杂志,1994,11(4):206-213. GAO D Q, LIU Y J. Study on synergetic killing effect of bromogeramine with physical and chemical agents on bacterial spores[J]. Chinese Journal of Disinfection, 1994, 11(4):206-213(in Chinese).
[7] 卢伟,曹琛,邢佐平,等.新洁尔灭对中华虎头蟹幼体的急性毒性试验[J]. 水产科学,2014,33(9):587-590. LU W, CAO C, XING Z P, et al. Acute toxicity of bromo-geraminum to Chinese tiger crab orithyia sinica larvae[J]. Fisheries Science, 2014, 33(9):587-590(in Chinese).
[8] 孙伟,李清军,焦奎,等.有机小分子与DNA的相互作用及其在DNA分析中的应用[J].化学试剂,2005,27(3):149-152. SUN W, LI Q J, JIAO K, et al. Interaction of small organic molecules with DNA and its analytical application[J]. Chemical Reagents. 2005, 27(3):149-152(in Chinese).
[9] ZOU H Y,WU H L,ZHANG Y, et al. Studying the interaction of pirarubicin with DNA and determining pirarubicin in human urine samples:Combining exdtation-emission fluorescence matrices with second-order calibration methods[J].Journal of Fluorescence, 2009, 19(6):955-966. [10] BI S, ZHANG H, QIAO C, et al. Studies of interaction of emodin and DNA in the presence of ethidium bromide by spectroscopic method[J]. Spectrochimica Acta Part A Molecular & Biomolecular Spectroscopy, 2008, 69(1):123-129. [11] CAO Y, HE X, GAO Z, et al. Fluorescence energy transfer between acridine orange and safranine T and its application in the determination of DNA[J]. Talanta, 1999, 49(2):377-383. [12] MOGHADDAM F G, KOMPANY-ZAREH M, GHOLAMI S. Study of neutral red interaction with DNA by resolution of rank deficient multi-way fluorescence data[J]. Journal of Pharmaceutical & Biomedical Analysis, 2012, 70(21):388-395. [13] 叶芳贵,谢增鸿,林旭聪,等.DNA荧光探针-荧光素-中性红体系的研究[J].分析测试技术与仪器,2003,9(2):74-79. YE F G, XIE Z H, LIN X C, et al. Fluorescein-neutral red pair as a new donor-acceptor set for fluorescence energy transfer study of DNA[J]. Analysis and Testing Technology and Instrments, 2003, 9(2):74-79(in Chinese).
[14] 吴会灵,杨原,张重杰,等.小分子与核酸相互作用的研究进展[J].分析化学,2004,32(9):1256-1261. WU H L, YANG P Y, ZHANG Z J, et al. Study on the interaction of small molecules with nucleic acids[J]. Chinese Journal of Analytical Chemistry, 2004, 32(9):1256-1261(in Chinese).
[15] 于婷婷,何平,梁艳,等. 有机药物分子与DNA相互作用的研究进展[J].化学研究与应用,2009,21(7):937-944. YU T T, HE P, LIANG Y, et al. Development of research on the interaction of organic pharmaceutical molecules with DNA[J]. Chemical Research and Application, 2009, 21(7):937-944(in Chinese).
[16] 颜流水,付结友,罗旭彪,等.环境内分泌干扰物与DNA相互作用的光谱研究[J].环境化学,2008,27(3):375-377. YAN L S, FU J Y, LUO X B, et al. Studies on the interaction of endocrine disrupting chemicals with DNA by spectrophotometry[J]. Environmental Chemistry, 2008, 27(3):375-377(in Chinese).
[17] 童裳伦,胡洲,刘维屏.光谱法研究百草枯与小牛胸腺DNA的相互作用[J].化学学报,2010,68(14):1404-1410. TONG C L, HU Z, LIU W P. Study on the interaction between paraquat and calf thymus DNA by spectral methods[J]. Acta Chimica Sinca, 2010, 68(14):1404-1410(in Chinese).
[18] LI M T, HUANG J, ZHOU X, et al. Spectra and DNA-binding properties of two novel mixed-ligand complexes containing organosulfonate[J]. Journal of Wuhan University of Technology, 2009, 24(2):181-185. [19] 刘雪平,冯素玲,潘自红,等.溴化乙锭探针研究劳氏青莲与脱氧核糖核酸的相互作用[J].光谱学与光谱分析,2006,26(10):1895-1898. LIU X P, FENG S L, PAN Z H, et al. Studies on the interaction between thionine and deoxyribo-nucleic acid by ethidium bromide probe[J]. Spectroscopy and Spectral Analysis, 2006, 26(10):1895-1898(in Chinese).
[20] 张立金,闵顺耕,赵慈.光谱法研究甲萘威与DNA的相互作用[J].环境化学,2004,23(5):520-524. ZHANG L J, MIN S G, ZHAO C. The Interaction of Carbaryl with calf thymus DNA[J]. Environmental Chemistry, 2004, 23(5):520-524(in Chinese).
[21] WANG Z X, LIU D J, DONG S J. Voltammetric and spectroscopic studies on methyl green and cationic lipid bound to calf thymus DNA[J]. Biophysical Chemistry, 2000, 87(2-3):179-184. [22] RAMAKRISHNAN S, PALANIANDAVAR M. Mixed-ligand copper(Ⅱ) complexes of dipicolylamine and 1,10-phenanthrolines:The role of diimines in the interaction of the complexes with DNA[J]. Journal of Chemical Sciences, 2005, 28(2):179-186. [23] ZHOU Y, LI Y. Studies of interaction between poly(allylamine hydrochloride) and double helix DNA by spectral methods[J]. Biophysical Chemistry, 2004, 107(3):273-281. [24] WANG Y, YU S. Interaction between poly(amidoamine) dendrimers and DNA studied by spectroscopic methods[J]. Chinese Science Bulletin, 2005, 50(19):2161-2165. [25] LING J Y, LIN J Q, ZHANG G Y, et al. Study on the binding effect between cordycepin and calf thymus DNA by circular dichroism[J]. Chinese Chemical Letters, 2006, 17(10):1351-1352. [26] PRIVALOV P, DRAGAN A, CRANE-ROBINSON C, et al. What drives proteins into the major or minor grooves of DNA?[J]. Journal of Molecular Biology, 2007, 365(1):1-9. -

计量
- 文章访问数: 1607
- HTML全文浏览数: 1525
- PDF下载数: 402
- 施引文献: 0